I am looking for a 3D plotting and post analysis tool, specifically which can generate figures like the following. It is preferred the tool has a Linux distribution. The figure is copied from here. 
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2 Answers
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Plotly is an excellent tool for 2D and 3D data. It is quite simple to use with python as well.
answered Jun 27, 2020 at 0:16
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If anyone is interested, I found that such graphs can be created with the software Origin. It is a cheap commercial software (student version: $69 per year). It's certainly worth the price.